Commit 9d0ef505 authored by Pauline Pommeret's avatar Pauline Pommeret

Description

parent 1d53cf19
......@@ -17,13 +17,7 @@ if __name__ == "__main__":
DBCURSOR = database.PGCursor()
# Use argparse to parse arguments. We first create a parser.
text = "This program creates a postgresql database that holds the following data:
- sequence information (name, accession number, sequence alphabet, description, etc)
- analysis parameters (Student table's alpha, number of bp considered as center, smooth window, etc)
- relevant information on the TRX signal FFT
- relevant information on the MD helicoidal parameters FFT
- Spearman and Pearson correlations between every helicoidal parameters for every frame of the MD
"
text = "This program creates a postgresql database that holds the following data:\n - sequence information (name, accession number, sequence alphabet, description, etc)\n - analysis parameters (Student table's alpha, number of bp considered as center, smooth window, etc)\n - relevant information on the TRX signal FFT\n - relevant information on the MD helicoidal parameters FFT\n - Spearman and Pearson correlations between every helicoidal parameters for every frame of the MD\nThe data directory must be organized this way:\n datadir\n \-dir1\n \-group (mandatory)\n \-sequence.fasta (mandatory)\n \-rise.dat\n \-roll.dat\n \-tilt.dat\n \-twist.dat\n \-shift.dat\n \-slide.dat\n \-...\n"
PARSER = argparse.ArgumentParser(description=text, formatter_class=RawDescriptionHelpFormatter)
# Adding arguments to the parser
......
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